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Enumeration of coliform bacteria and Escherichia coli

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HPA STANDARD METHOD<br />

ENUMERATION OF<br />

COLIFORM BACTERIA<br />

AND<br />

ESCHERICHIA COLI<br />

BY MEMBRANE FILTRATION<br />

W 2<br />

Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory<br />

Centre for Infections<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 1 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


STATUS OF NATIONAL STANDARD METHODS<br />

National St<strong>and</strong>ard Methods, which include st<strong>and</strong>ard operating procedures (SOPs), algorithms <strong>and</strong><br />

guidance notes, promote high quality practices <strong>and</strong> help to assure the comparability <strong>of</strong> diagnostic<br />

information obtained in different laboratories. This in turn facilitates st<strong>and</strong>ardisation <strong>of</strong> surveillance<br />

underpinned by research, development <strong>and</strong> audit <strong>and</strong> promotes public health <strong>and</strong> patient confidence<br />

in their healthcare services. The methods are well referenced <strong>and</strong> represent a good minimum<br />

st<strong>and</strong>ard for clinical <strong>and</strong> public health microbiology. However, in using National St<strong>and</strong>ard Methods,<br />

laboratories should take account <strong>of</strong> local requirements <strong>and</strong> may need to undertake additional<br />

investigations. The methods also provide a reference point for method development.<br />

National St<strong>and</strong>ard Methods are developed, reviewed <strong>and</strong> updated through an open <strong>and</strong> wide<br />

consultation process where the views <strong>of</strong> all participants are considered <strong>and</strong> the resulting documents<br />

reflect the majority agreement <strong>of</strong> contributors.<br />

Representatives <strong>of</strong> several pr<strong>of</strong>essional organisations, including those whose logos appear on the<br />

front cover, are members <strong>of</strong> the working groups which develop National St<strong>and</strong>ard Methods. Inclusion<br />

<strong>of</strong> an organisation’s logo on the front cover implies support for the objectives <strong>and</strong> process <strong>of</strong> preparing<br />

st<strong>and</strong>ard methods. The representatives participate in the development <strong>of</strong> the National St<strong>and</strong>ard<br />

Methods but their views are not necessarily those <strong>of</strong> the entire organisation <strong>of</strong> which they are a<br />

member. The current list <strong>of</strong> participating organisations can be obtained by emailing<br />

st<strong>and</strong>ards@hpa.org.uk.<br />

The performance <strong>of</strong> st<strong>and</strong>ard methods depends on the quality <strong>of</strong> reagents, equipment, commercial<br />

<strong>and</strong> in-house test procedures. Laboratories should ensure that these have been validated <strong>and</strong> shown<br />

to be fit for purpose. Internal <strong>and</strong> external quality assurance procedures should also be in place.<br />

Whereas every care has been taken in the preparation <strong>of</strong> this publication, the Health Protection<br />

Agency or any supporting organisation cannot be responsible for the accuracy <strong>of</strong> any statement or<br />

representation made or the consequences arising from the use <strong>of</strong> or alteration to any information<br />

contained in it. These procedures are intended solely as a general resource for practising<br />

pr<strong>of</strong>essionals in the field, operating in the UK, <strong>and</strong> specialist advice should be obtained where<br />

necessary. If you make any changes to this publication, it must be made clear where changes have<br />

been made to the original document. The Health Protection Agency (HPA) should at all times be<br />

acknowledged.<br />

The HPA is an independent organisation dedicated to protecting people’s health. It brings together<br />

the expertise formerly in a number <strong>of</strong> <strong>of</strong>ficial organisations. More information about the HPA can be<br />

found at www.hpa.org.uk.<br />

The HPA aims to be a fully Caldicott compliant organisation. It seeks to take every possible<br />

precaution to prevent unauthorised disclosure <strong>of</strong> patient details <strong>and</strong> to ensure that patient-related<br />

records are kept under secure conditions 1 .<br />

More details can be found on the website at www.evaluations-st<strong>and</strong>ards.org.uk. Contributions to the<br />

development <strong>of</strong> the documents can be made by contacting st<strong>and</strong>ards@hpa.org.uk.<br />

Please note the references are now formatted using Reference Manager s<strong>of</strong>tware. If you alter or delete text without<br />

Reference Manager installed on your computer, the references will not be updated automatically.<br />

Suggested citation for this document:<br />

Health Protection Agency (2007). <strong>Enumeration</strong> <strong>of</strong> <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> <strong>Escherichia</strong> <strong>coli</strong> by membrane<br />

filtration. National St<strong>and</strong>ard Method W 2 Issue 4.<br />

http://www.hpa-st<strong>and</strong>ardmethods.org.uk/pdf_sops.asp.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 2 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


INDEX<br />

STATUS OF NATIONAL STANDARD METHODS ................................................................................2<br />

INDEX......................................................................................................................................................3<br />

AMENDMENT PROCEDURE .................................................................................................................4<br />

SCOPE OF DOCUMENT ........................................................................................................................5<br />

INTRODUCTION .....................................................................................................................................5<br />

BACKGROUND........................................................................................................................................5<br />

1 DEFINITIONS ...................................................................................................................................6<br />

2 PRINCIPLE.......................................................................................................................................6<br />

3 SAFETY CONSIDERATIONS ..........................................................................................................6<br />

3.1 SAMPLE TRANSPORT AND STORAGE .............................................................................................6<br />

3.2 SAMPLE PROCESSING..................................................................................................................6<br />

4 EQUIPMENT.....................................................................................................................................7<br />

5 CULTURE MEDIA AND REAGENTS ..............................................................................................7<br />

6 SAMPLE PROCESSING ..................................................................................................................8<br />

6.1 SAMPLE PREPARATION AND DILUTIONS .........................................................................................8<br />

6.2 FILTRATION AND INCUBATION .......................................................................................................9<br />

6.3 COUNTING OF COLONIES..............................................................................................................9<br />

6.4 CONFIRMATORY TESTS ................................................................................................................9<br />

7 CALCULATION OF RESULTS ......................................................................................................10<br />

8 REPORTING...................................................................................................................................10<br />

9 QUALITY CONTROL .....................................................................................................................11<br />

9.1 MEMBRANE FILTRATION .............................................................................................................11<br />

9.2 CONFIRMATORY TESTS ..............................................................................................................11<br />

10 REFERENCE FACILITIES .............................................................................................................12<br />

11 ACKNOWLEDGEMENTS AND CONTACTS ................................................................................12<br />

FLOWCHART SHOWING THE PROCESS FOR THE ENUMERATION OF COLIFORM BACTERIA<br />

AND ESCHERICHIA COLI BY MEMBRANE FILTRATION ...............................................................13<br />

REFERENCES ......................................................................................................................................14<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 3 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


AMENDMENT PROCEDURE<br />

Controlled document<br />

reference<br />

Controlled document title<br />

W 2<br />

<strong>Enumeration</strong> <strong>of</strong> <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> <strong>Escherichia</strong> <strong>coli</strong> by membrane<br />

filtration<br />

Each National St<strong>and</strong>ard Method has an individual record <strong>of</strong> amendments. The current amendments<br />

are listed on this page. The amendment history is available from st<strong>and</strong>ards@hpa.org.uk.<br />

On issue <strong>of</strong> revised or new pages each controlled document should be updated by the copyholder in<br />

the laboratory.<br />

Amendment<br />

Number/<br />

Date<br />

7/<br />

04.10.07<br />

Issue no.<br />

Discarded<br />

Insert<br />

Issue<br />

no.<br />

Page Section(s) involved Amendment<br />

4 4.1 9 6.2 Filtration <strong>and</strong><br />

incubation<br />

Corrected the temperature<br />

tolerance from 44°C ± 1°C to<br />

44°C ± 0.5°C in line with MDW<br />

2002.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 4 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


ENUMERATION OF COLIFORM BACTERIA AND<br />

ESCHERICHIA COLI BY MEMBRANE<br />

FILTRATION<br />

SCOPE OF DOCUMENT<br />

The method described is applicable to the enumeration <strong>of</strong> <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> <strong>Escherichia</strong> <strong>coli</strong> in<br />

water samples intended for human consumption <strong>and</strong> in pool waters by the membrane filtration<br />

technique. It may be used for environmental <strong>and</strong> recreational water samples but not for designated<br />

bathing waters sampled under the bathing water regulations 2 . These samples are analysed using<br />

methods detailed by the Environment Agency.<br />

INTRODUCTION<br />

Background<br />

Coliform <strong>bacteria</strong> are widely regarded as the most reliable microbiological indicator <strong>of</strong> water quality.<br />

They are found in the human <strong>and</strong> animal intestine <strong>and</strong> may serve as indicators <strong>of</strong> potential faecal<br />

pollution but may also be environmental in origin. ‘Faecal <strong><strong>coli</strong>form</strong> <strong>bacteria</strong>’ <strong>and</strong> E. <strong>coli</strong> are only found in<br />

human <strong>and</strong> animal intestines <strong>and</strong> tests for their presence in water are necessary to confirm that pollution<br />

is <strong>of</strong> human <strong>and</strong>/or animal origin. The term ‘faecal <strong><strong>coli</strong>form</strong>’ is not precise <strong>and</strong> is consequently not used<br />

in this National St<strong>and</strong>ard Method (NSM). In the context <strong>of</strong> water microbiology in the United Kingdom<br />

faecal <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> are regarded as being E. <strong>coli</strong>.<br />

Coliform <strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong> are sensitive to the disinfection processes used in water treatment <strong>and</strong> do<br />

not usually multiply in water particularly in temperate zones. These organisms should not be present in<br />

a 250 mL sample <strong>of</strong> mineral waters or drinking waters in bottles <strong>and</strong> containers or 100 mL for other<br />

waters <strong>of</strong> potable quality 3-11 .<br />

This method is based on the method described in the Microbiology <strong>of</strong> Drinking Water 2002 document 12 .<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 5 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


1 DEFINITIONS<br />

In the context <strong>of</strong> this method the following definitions apply:<br />

Presumptive <strong><strong>coli</strong>form</strong> <strong>bacteria</strong><br />

Organisms which produce acid from lactose <strong>and</strong> form all shades <strong>and</strong> sizes <strong>of</strong> yellow colonies on<br />

membranes soaked in membrane lauryl sulphate broth (MLSB) after incubation at 30°C for 4<br />

hours followed by 37°C for 14 hours.<br />

Presumptive E. <strong>coli</strong><br />

Organisms which produce acid from lactose <strong>and</strong> form all shades <strong>and</strong> sizes <strong>of</strong> yellow colonies<br />

on membranes soaked in MLSB after incubation at 30°C for 4 hours followed by incubation at<br />

44°C for 14 hours.<br />

Coliform <strong>bacteria</strong> (total <strong><strong>coli</strong>form</strong>s)<br />

Presumptive <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> which produce acid from lactose at 37°C within 48 hours, are<br />

oxidase negative <strong>and</strong> possess β-galactosidase.<br />

E. <strong>coli</strong><br />

Presumptive E. <strong>coli</strong> which also produce indole from tryptophan after incubation at 44°C for 24<br />

hours. Most strains produce β-glucuronidase.<br />

2 PRINCIPLE<br />

A measured volume <strong>of</strong> the sample or a dilution <strong>of</strong> the sample is filtered through a membrane<br />

that is capable <strong>of</strong> retaining the organisms. The membrane is incubated on an absorbent pad<br />

saturated with a selective differential broth medium. Colonies <strong>of</strong> the target organisms are<br />

counted, confirmatory tests carried out <strong>and</strong> the result calculated as the colony count per<br />

100 mL or 250 mL <strong>of</strong> sample.<br />

3 SAFETY CONSIDERATIONS 13-18<br />

Normal microbiology laboratory precautions apply.<br />

Care should be taken where manual lifting <strong>of</strong> large volumes <strong>of</strong> water is required.<br />

3.1 SAMPLE TRANSPORT AND STORAGE<br />

Compliance with current postal <strong>and</strong> transportation regulations as stated in the Advisory<br />

Committee on Dangerous Pathogens 2005 19 is essential.<br />

3.2 SAMPLE PROCESSING<br />

Care must be taken when using a boiling waterbath (National St<strong>and</strong>ard Method: W1 Section<br />

2) 20 .<br />

• Amyl alcohol <strong>and</strong> concentrated hydrochloric acid used in the preparation <strong>of</strong> Kovacs reagent<br />

must be h<strong>and</strong>led with care<br />

• Acid protective gloves are to be worn when performing the indole test<br />

The above guidance should be supplemented with local COSHH <strong>and</strong> risk assessments<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 6 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


4 EQUIPMENT<br />

Usual laboratory equipment <strong>and</strong> in addition:<br />

• Membrane filtration manifold<br />

• Filter funnels graduated to 50 mL <strong>and</strong> 100 mL<br />

• Pyrex vacuum flask with protective jacket or equivalent: large volume eg 5 L<br />

• Vacuum pump with moisture trap or protective filter, or alternative vacuum source<br />

• Stainless steel flat tipped forceps or sterilisable equivalent<br />

• Boiling waterbath (instrument steriliser)<br />

• Cycling incubator: 30°C ± 1.0°C <strong>and</strong> 37°C ± 1.0°C<br />

• Cycling incubator: 30°C ± 1.0°C <strong>and</strong> 44°C ± 0.5°C<br />

• Incubator: 37°C ± 1.0°C<br />

• Water bath: 44°C ± 0.5°C<br />

• Petri dishes<br />

• Sterile absorbent pads<br />

• Cellulose ester 0.45 µm gridded filters<br />

• Automatic pipettors <strong>and</strong> associated sterile pipette tips capable <strong>of</strong> delivering up to10 mL<br />

<strong>and</strong> 1 mL volumes (optional)<br />

• Pipettes / (sterile total delivery) 10 mL <strong>and</strong> 1 mL, graduated in 0.1 mL (optional)<br />

• Pastettes<br />

5 CULTURE MEDIA AND REAGENTS<br />

Media with the following formulations should be used. Follow MDW 2002 12<br />

preparation <strong>and</strong> shelf-life times.<br />

for in-house<br />

Equivalent commercial media may be used; follow the manufacturer’s instructions.<br />

Peptone saline diluent (Maximum recovery diluent)<br />

Peptone<br />

Sodium chloride<br />

Water<br />

pH 7.0 ± 0.2 at 25°C<br />

1.0 g<br />

8.5 g<br />

1 L<br />

Membrane lauryl sulphate broth (MLSB)<br />

Peptone<br />

Yeast extract<br />

Lactose<br />

Phenol red<br />

Sodium lauryl sulphate<br />

Water<br />

pH 7.4 ± 0.2 at 25°C<br />

40.0 g<br />

6.0 g<br />

30.0 g<br />

0.2 g<br />

1.0 g<br />

1 L<br />

Lactose peptone water (LPW)<br />

Peptone<br />

Sodium chloride<br />

Lactose<br />

Andrades indicator<br />

Water<br />

10.0 g<br />

5.0 g<br />

10.0 g<br />

10 mL<br />

1 L<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 7 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


pH 7.5 ± 0.2 at 25°C<br />

2% Tryptone water (TW)<br />

Tryptone<br />

Sodium chloride<br />

Water<br />

pH 7.5 ± 0.2 at 25°C<br />

20.0 g<br />

5.0 g<br />

1 L<br />

MacConkey agar (MA)<br />

Bile Salts<br />

Peptone<br />

Lactose<br />

Sodium chloride<br />

Neutral red<br />

Agar<br />

Water<br />

pH 7.4 ± 0.2 at 25°C<br />

5.0 g<br />

20.0 g<br />

10.0 g<br />

5.0 g<br />

0.05 g<br />

12.0 g<br />

1 L<br />

Nutrient agar (NA)<br />

Meat extract<br />

Peptone<br />

Sodium chloride<br />

Agar<br />

Water<br />

pH 7.5 ± 0.2 at 25°C<br />

10.0 g<br />

10.0 g<br />

5.0 g<br />

15.0 g<br />

1 L<br />

Kovacs reagent 21<br />

p – Dimethylaminobenzaldehyde<br />

Amyl alcohol (analytical grade reagent,<br />

free from organic bases)<br />

Hydrochloric acid (concentrated)<br />

5.0 g<br />

75 mL<br />

25 mL<br />

Oxidase reagent (prepare fresh or use commercially prepared strips etc)<br />

Tetramethyl – p – phenylenediamine<br />

Hydrochloride<br />

Water<br />

0.1 g<br />

10 mL<br />

6 SAMPLE PROCESSING<br />

6.1 SAMPLE PREPARATION AND DILUTIONS<br />

The nature <strong>of</strong> the request <strong>and</strong> condition <strong>of</strong> the sample should be noted on arrival.<br />

Water samples should be received <strong>and</strong> h<strong>and</strong>led as described in National St<strong>and</strong>ard Method:<br />

W 1 Section 5 20 .<br />

The sample should be stored <strong>and</strong> transported at 2°C – 8°C. Samples should be analysed as<br />

soon as is practicable on the day <strong>of</strong> collection. In exceptional circumstances, if there is a<br />

delay, storage under the above conditions should not exceed 24 hours before the<br />

commencement <strong>of</strong> analysis.<br />

Following the procedures laid down in National St<strong>and</strong>ard Method: W 1 Section 6 20 , select<br />

suitable volumes for analysis <strong>and</strong> prepare any necessary dilutions.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 8 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


6.2 FILTRATION AND INCUBATION<br />

Place an absorbent pad in each Petri dish <strong>and</strong> add sufficient MLSB to saturate the pad<br />

(usually 2.5 mL depending on the br<strong>and</strong> <strong>of</strong> pad) <strong>and</strong> soak for at least 5 minutes. If<br />

necessary, remove any excess medium from the saturated pad using, for example, a sterile<br />

pipette / pastette, before the membrane is placed on the pad. For each br<strong>and</strong> <strong>of</strong> pad it is<br />

important to check the amount <strong>of</strong> medium that is to be added <strong>and</strong> the time necessary for<br />

soaking in order to prevent drying out during incubation.<br />

Following the procedures laid down in National St<strong>and</strong>ard Method: W 1 Section 6 20 :<br />

Filter a measured volume <strong>of</strong> sample through the membrane. For bottled mineral waters use 250<br />

mL water, for other potable quality waters use volumes <strong>of</strong> 100 mL. For surface waters use 100<br />

mL <strong>and</strong>, if expected to be highly polluted, use 10 mL <strong>and</strong> 1 mL volumes. Use two filters for each<br />

sample, one for <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> one for E. <strong>coli</strong>. For mains drinking water <strong>and</strong> pool waters<br />

it is acceptable to use a single membrane where the result is likely or expected to be negative,<br />

incubated at 37°C, for both <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong>.<br />

Place the membrane on a pad soaked in MLSB. Put the membranes <strong>and</strong> pads in a sealed<br />

container <strong>and</strong> place in an incubator as follows:<br />

For <strong><strong>coli</strong>form</strong> <strong>bacteria</strong>: 30°C ± 1°C for 4 hours ± 1 hour followed by 37°C ± 1°C for 14 hours ± 1<br />

hour.<br />

For E. <strong>coli</strong>: 30°C ± 1°C for 4 hours ± 1 hour followed by 44°C ± 0.5°C for 14 hours ± 1 hour.<br />

6.3 COUNTING OF COLONIES<br />

After a minimum total incubation period <strong>of</strong> 18 hours, enumerate the presumptive <strong><strong>coli</strong>form</strong><br />

<strong>bacteria</strong> <strong>and</strong> presumptive E. <strong>coli</strong> by counting <strong>and</strong> recording all yellow colonies irrespective <strong>of</strong><br />

size. As colony colours are liable to change on cooling <strong>and</strong> st<strong>and</strong>ing, it is necessary to perform<br />

the count within 15 minutes <strong>of</strong> removing from the incubator 12 . It is important to note factors<br />

affecting the result eg when pink colonies are present in high numbers they may interfere with<br />

the growth or count <strong>of</strong> lactose fermenting colonies.<br />

6.4 CONFIRMATORY TESTS<br />

Select colonies for confirmation as described in National St<strong>and</strong>ard Method: W 1 Section 6.3 20 .<br />

Sub-culture colonies from both the 37°C <strong>and</strong> 44°C membranes for confirmation as <strong><strong>coli</strong>form</strong><br />

<strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong>. Presumptive <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> isolated at 37°C may confirm as<br />

E. <strong>coli</strong> <strong>and</strong> presumptive E. <strong>coli</strong> colonies isolated at 44°C may confirm as <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> but<br />

not E. <strong>coli</strong>. Also, colonies may be isolated on only one <strong>of</strong> the two membranes. When only<br />

one membrane has been used <strong>and</strong> incubated at 37°C, colonies should be confirmed for both<br />

<strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong>. If the confirmed count for E. <strong>coli</strong> from the 44°C membrane filter<br />

is greater than the confirmed count for <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> from the 37°C membrane filter, then<br />

the higher count must be recorded as the confirmed count for <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> disregarding<br />

the colonies on the 37°C membrane. For example, if zero <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> have been<br />

isolated at 37°C but two E. <strong>coli</strong> isolated at 44°C, then the results should be reported as two<br />

<strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> two E. <strong>coli</strong> 12 .<br />

Coliform <strong>bacteria</strong><br />

Sub-culture selected yellow colonies to lactose peptone water (LPW), MacConkey agar (MA)<br />

<strong>and</strong> nutrient agar (NA). Spread the MA <strong>and</strong> NA plates in a manner to give isolated colonies.<br />

Place the LPW in an incubator at 37°C. Examine for acid production after 20 ± 4 hours <strong>and</strong> if<br />

results are negative examine after further 20 ± 4 hours incubation. Place the MA <strong>and</strong> NA in an<br />

incubator at 37°C for 20 hours ± 4 hours. Coliform <strong>bacteria</strong> produce colonies on MA that are<br />

usually circular in shape, convex with a smooth surface <strong>and</strong> an entire edge. They are various<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 9 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


shades <strong>of</strong> red in colour. If the growth on MA/NA is not pure then LPW should be repeated with<br />

a pure culture obtained from the MA/NA.<br />

Perform an oxidase test on colonies from the NA plate. Pure cultures are essential for this test<br />

<strong>and</strong> it may be necessary to make further sub-cultures from characteristic colonies on the MA to<br />

NA. Moisten a piece <strong>of</strong> filter paper in a Petri dish with 2 – 3 drops <strong>of</strong> freshly prepared oxidase<br />

reagent or equivalent. Using a stick, glass rod or platinum/plastic (not nichrome) loop transfer a<br />

colony <strong>of</strong> the test organism to the filter paper <strong>and</strong> rub it on the moistened area. A positive<br />

reaction is indicated by the appearance <strong>of</strong> a dark purple colour within 10 seconds. No colour<br />

change or a purplish colour which develops later are both negative reactions.<br />

Coliform <strong>bacteria</strong> are oxidase negative <strong>and</strong> produce acid from lactose.<br />

E. <strong>coli</strong><br />

Sub-culture the same colonies selected for confirmation as <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> to LPW <strong>and</strong> TW.<br />

Place in a waterbath at 44°C for 20 hours ± 4 hours.<br />

Perform an indole test on the TW culture as follows:<br />

Add approximately 0.2 mL Kovacs reagent <strong>and</strong> shake gently. A deep red colour developing<br />

almost immediately in the upper layer indicates a positive result (indole production). E. <strong>coli</strong> is<br />

indole positive, produces acid in LPW <strong>and</strong> is oxidase negative.<br />

7 CALCULATION OF RESULTS<br />

Calculate the presumptive count <strong>of</strong> the test organisms as follows:<br />

Presumptive count / 100 mL = Number <strong>of</strong> colonies counted x 100<br />

Volume tested<br />

Following the procedures described in National St<strong>and</strong>ard Method: W 1 Section 7 20 , calculate<br />

the number <strong>of</strong> confirmed <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong> present in the specified volume <strong>of</strong> the<br />

original sample.<br />

8 REPORTING<br />

Report the results using the procedure described in National St<strong>and</strong>ard Method: W 1 Section<br />

9 20 . Interpretation <strong>of</strong> results should follow QSOP 57 – The microbiological examination <strong>of</strong> water<br />

samples 22 .<br />

If <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> or E. <strong>coli</strong> are not detected, report as:<br />

‘Not detected in 100 mL’<br />

If the test organisms are detected report as:<br />

‘a per 100 mL’<br />

where a is the confirmed count<br />

When E. <strong>coli</strong> has been confirmed from both the 37°C <strong>and</strong> 44°C membrane, report the higher<br />

count. If E. <strong>coli</strong> or other <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> are detected at 44°C <strong>and</strong> when there are no colonies<br />

at 37°C be sure to report the colonies at 44°C as <strong><strong>coli</strong>form</strong> <strong>bacteria</strong>. It is illogical to report for<br />

example:<br />

E. <strong>coli</strong>: “2 per 100 mL” <strong>and</strong><br />

<strong><strong>coli</strong>form</strong> <strong>bacteria</strong>: “Not detected in 100 mL” from the same sample.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 10 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


For natural mineral waters, bottled waters or waters in containers, the result is reported as the<br />

count per 250 mL.<br />

9 QUALITY CONTROL<br />

9.1 MEMBRANE FILTRATION<br />

When the membrane filtration technique is used, internal quality control procedures must be<br />

carried out at least once daily depending on the workload <strong>of</strong> the laboratory. If more than one<br />

batch <strong>of</strong> media is used it is necessary to repeat the quality control for each batch (see National<br />

St<strong>and</strong>ard Method W 1 Section 10) 20 .<br />

The quantitative internal quality controls are performed using suspensions <strong>of</strong> positive <strong>and</strong><br />

negative control organisms known to contain less than 100 colony forming units in the volume<br />

filtered.<br />

Positive controls<br />

<strong>Escherichia</strong> <strong>coli</strong> NCTC 9001 for incubation at 37°C (<strong><strong>coli</strong>form</strong> <strong>bacteria</strong> positive) or 44°C (E. <strong>coli</strong><br />

positive)<br />

Klebsiella aerogenes NCTC 9528 for incubation at 37°C (<strong><strong>coli</strong>form</strong> <strong>bacteria</strong> positive)<br />

Negative controls<br />

Klebsiella aerogenes NCTC 9528 for incubation at 44°C<br />

Pseudomonas aeruginosa NCTC 10662<br />

Blank control<br />

Filter 100 mL <strong>of</strong> sterile distilled water or peptone saline diluent using the same funnel as used for<br />

the positive control following disinfection.<br />

Incubate all quality control tests in parallel with routine tests, proceed with confirmatory tests <strong>and</strong><br />

determine the counts.<br />

9.2 CONFIRMATORY TESTS<br />

For each batch <strong>of</strong> confirmatory tests inoculate known positive <strong>and</strong> negative controls as shown<br />

below:<br />

Lactose peptone water<br />

Test strains<br />

37°C 44°C<br />

24 or 48 hours 24 hours<br />

E. <strong>coli</strong> NCTC 9001 Not necessary Acid<br />

Klebsiella aerogenes NCTC 9528 Acid No growth<br />

Pseudomonas aeruginosa NCTC 10662 No acid No acid<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 11 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


Oxidase test<br />

Test strains<br />

Pseudomonas aeruginosa NCTC 10662<br />

Positive (purple)<br />

E. <strong>coli</strong> NCTC 9001 Negative (colourless)<br />

Indole production in tryptone water 44°C/24 hours<br />

Test strains<br />

E. <strong>coli</strong> NCTC 9001 Positive (red)<br />

Klebsiella aerogenes NCTC 9528 Negative (colourless)<br />

Pseudomonas aeruginosa NCTC 10662<br />

Negative (colourless)<br />

10 REFERENCE FACILITIES<br />

N/A<br />

11 ACKNOWLEDGEMENTS AND CONTACTS<br />

This National St<strong>and</strong>ard Method has been developed, reviewed <strong>and</strong> revised by the Water<br />

Working Group for St<strong>and</strong>ard Methods (http://www.hpast<strong>and</strong>ardmethods.org.uk/wg_water.asp).<br />

The contributions <strong>of</strong> many individuals in Food,<br />

Water <strong>and</strong> Environmental laboratories, reference laboratories <strong>and</strong> specialist organisations<br />

who have provided information <strong>and</strong> comment during the development <strong>of</strong> this document are<br />

acknowledged.<br />

The National St<strong>and</strong>ard Methods are issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards<br />

Laboratory, Centre for Infections, Health Protection Agency London.<br />

For further information please contact us at:<br />

St<strong>and</strong>ards Unit<br />

Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory<br />

Centre for Infections<br />

Health Protection Agency<br />

Colindale<br />

London<br />

NW9 5EQ<br />

E-mail: st<strong>and</strong>ards@hpa.org.uk<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 12 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


FLOWCHART SHOWING THE PROCESS FOR THE<br />

ENUMERATION OF COLIFORM BACTERIA AND<br />

ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Transport to laboratory at 2°C – 8°C out <strong>of</strong> direct sunlight<br />

in suitable containers<br />

<br />

Store at 2°C – 8°C in the dark <strong>and</strong> analyse as soon as is practicable on the day <strong>of</strong> collection,<br />

otherwise within 24 hours <strong>of</strong> collection<br />

<br />

Mix sample well <strong>and</strong> make any necessary dilutions<br />

<br />

Filter<br />

<br />

Place filter on pad soaked in MLSB<br />

<br />

Incubate at 30°C ± 1°C for 4 hours ± 1 hour <strong>and</strong><br />

37°C for 14hours ± 1 hour<br />

<br />

Incubate at 30°C ± 1°C for 4 hours ± 1 hour<br />

<strong>and</strong> 44°C for 14 hours ± 1 hour<br />

<br />

Count yellow colonies<br />

within 15 minutes <strong>of</strong> removal from incubator<br />

<br />

<br />

Count yellow colonies<br />

within 15 minutes <strong>of</strong> removal from incubator<br />

Sub-culture to LPW, MA, <strong>and</strong> NA (oxidase test)<br />

for incubation at 37°C (<strong><strong>coli</strong>form</strong> <strong>bacteria</strong>) <strong>and</strong> to LPW <strong>and</strong> TW at 44°C (E. <strong>coli</strong>)<br />

<br />

Perform biochemical tests <strong>and</strong> calculate counts <strong>of</strong> <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> E. <strong>coli</strong><br />

<br />

Report <strong>and</strong> interpret using QSOP 57 – The microbiological examination <strong>of</strong> water samples 22<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 13 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


REFERENCES<br />

1. Department <strong>of</strong> Health NHS Executive: The Caldicott Committee. Report on the review <strong>of</strong> patientidentifiable<br />

information. London. December 1997.<br />

2. The Bathing Waters (Classification) Regulations 1991: Statutory Instrument No. 1597. HMSO.<br />

http://www.opsi.gov.uk/si/si1991/Uksi_19911597_en_1.htm.<br />

3. The Natural Mineral Water, Spring Water <strong>and</strong> Bottled Drinking Water Regulations (Statutory<br />

Instrument No. 666). London: HMSO; 2003.<br />

4. The Private Water Supplies Regulations (Statutory Instrument No. 2790). London: HMSO; 1991.<br />

5. The Water Supply (Water Quality) (Amendment) Regulations (Statutory Instrument No. 2885).<br />

London: HMSO; 2001.<br />

6. The Drinking Water in Containers Regulations (Statutory Instrument No. 743). London: HMSO;<br />

1994.<br />

7. PHLS. Hygiene for Hydrotherapy Pools. 2 nd ed. London: PHLS; 1999.<br />

8. Health <strong>and</strong> Safety Executive, Health Protection Agency. Management <strong>of</strong> Spa Pools - Controlling<br />

the Risks <strong>of</strong> Infection. http://www.hpa.org.uk/publications/2006/spa_pools/spa_pools.pdf.<br />

9. Pool Water Treatment Advisory group, editor. Swimming Pool Water - Treatment <strong>and</strong> Quality<br />

St<strong>and</strong>ards. Greenhouse Publishing; 1999.<br />

10. Industry Guide to Good Hygiene Practice: Vending <strong>and</strong> Dispensing Guide Supplement (to the<br />

Catering Guide). Chadwick House Group ; 2000.<br />

11. Council Directive 98/83/EC: Relating to the Quality <strong>of</strong> Water Intended for Human Consumption.<br />

Official Journal <strong>of</strong> the European Communities; 1998. p. L330-32-L330/53.<br />

12. St<strong>and</strong>ing Committee <strong>of</strong> Analysts. Environment Agency. The Microbiology <strong>of</strong> Drinking Water<br />

(2002). Methods for the Examination <strong>of</strong> Waters <strong>and</strong> Associated Materials - Part 4: Methods for the<br />

isolation <strong>and</strong> enumeration <strong>of</strong> <strong><strong>coli</strong>form</strong> <strong>bacteria</strong> <strong>and</strong> <strong>Escherichia</strong> <strong>coli</strong> (including E. <strong>coli</strong> 0157:H7).<br />

London. www.environment-agency.gov.uk/commondata/acrobat/mdwpart4.pdf .<br />

13. Public Health Laboratory Service St<strong>and</strong>ing Advisory Committee on Laboratory Safety. Safety<br />

Precautions: Notes for Guidance. 4 th ed. London: Public Health Laboratory Service (PHLS); 1993.<br />

14. Control <strong>of</strong> Substances Hazardous to Health Regulations 2002. General COSHH. Approved Code<br />

<strong>of</strong> Practice <strong>and</strong> Guidance, L5. Suffolk: HSE Books; 2002.<br />

15. Health <strong>and</strong> Safety Executive. 5 steps to risk assessment: a step by step guide to a safer <strong>and</strong><br />

healthier workplace, IND (G) 163 (REVL). Suffolk: HSE Books; 2002.<br />

16. Health <strong>and</strong> Safety Executive. A guide to risk assessment requirements: common provisions in<br />

health <strong>and</strong> safety law, IND (G) 218 (L). Suffolk: HSE Books; 2002.<br />

17. NHS Estates. Health Building Note 15. Facilities for pathology services. 2nd ed. London: The<br />

Stationary Office; 2005.<br />

18. Advisory Committee on Dangerous Pathogens. The management, design <strong>and</strong> operation <strong>of</strong><br />

microbiological containment laboratories. Suffolk: HSE Books; 2001.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 14 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk


19. Advisory Committee on Dangerous Pathogens. Biological agents: Managing the risks in<br />

laboratories <strong>and</strong> healthcare premises. HSE.<br />

http://www.advisorybodies.doh.gov.uk/acdp/publications.htm#1.<br />

20. National St<strong>and</strong>ard Method W 1 - General technique for the detection <strong>of</strong> <strong>bacteria</strong> by membrane<br />

filtration. London: Health Protection Agency; 2007.<br />

21. Barrow GI, Feltham R K A, editors. Cowan <strong>and</strong> Steel's Manual for the Identification <strong>of</strong> Medical<br />

Bacteria. 3rd ed. Cambridge: Cambridge University Press; 1993.<br />

22. National St<strong>and</strong>ard Method QSOP 57 - The microbiological examination <strong>of</strong> water samples. London:<br />

Health Protection Agency; 2005.<br />

ENUMERATION OF COLIFORM BACTERIA AND ESCHERICHIA COLI BY MEMBRANE FILTRATION<br />

Issue no: 4.1 Issue date: 03.10.07 Issued by St<strong>and</strong>ards Unit, Evaluations <strong>and</strong> St<strong>and</strong>ards Laboratory in conjunction with the<br />

Regional Food, Water <strong>and</strong> Environmental Coordinators Forum Page 15 <strong>of</strong> 15<br />

Reference no: W 2i4.1<br />

This SOP should be used in conjunction with the series <strong>of</strong> SOPs from the Health Protection Agency<br />

www.evaluations-st<strong>and</strong>ards.org.uk<br />

Email: st<strong>and</strong>ards@hpa.org.uk

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